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Post by Admin on Aug 13, 2020 20:13:25 GMT
Autosomal SNP-s We have predicted eye, hair and skin color phenotypes from 25 HirisPlex SNP-s, also suitable to predict non-European ancestry14, as summarized in Figs 3 and 4. Samples from different archaeological cultures and cemeteries showed a remarkable pattern of phenotypic distribution. All Hun and Avar age samples had inherently dark eye/hair colors, DK/701 being the only exception (Fig. 3). Moreover 6/14 Avar age samples were characterized with >0,7 black hair; >0,99 brown eye p-values, inferring 86,5% probability of non-European biogeographic ancestry14 in agreement with their anthropological, archaeological and historical evaluation. In contrast the Conquerors showed a wide variety of phenotypes clustered by cemeteries (Fig. 4). All individuals from the Sárrétudvari (SH), Magyarhomorog (MH) and majority from the Kenézlő (KEF) graveyards displayed European phenotypic patterns; blue eye and/or light hair with pale skin. In the three Karos cemeteries darker eye/hair colors predominated, 4/20 individuals having p-values consistent with non-European origin, nevertheless 5/20 individuals had light hair color indicating a rather mixed origin of this population, concurrent with their mtDNA and Y chromosomal Hg composition. Figure 3 Phenotypes and predicted genetic origin of Hun and Avar age individuals. Eye, hair and skin colors with their probability values were predicted from HIrisPlex markers (Supplementary Table S2), gray shaded values predict non-European ancestry. Most likely origin of individuals was calculated from 34 AIMs (Supplementary Table S2) with two methods; multinomial logistic regression and naive Bayesian classifier (supposing Hardy-Weinberg equilibrium). “Cannot be classified” indicates that maximum probabilities of most likely ancestral origin are below 0.34. Names of individuals carrying SNP variants associated with lactase persistence are highlighted with green. Abbreviations are the following: NA = lack of data, EU = Europe, EA = East Asia AF = Africa. Figure 4 We have also determined 34 AIMs, which can inform about the likely geographic origin of individuals, and used the Snipper App suite version 2.5 portal16 to assign biogeographic ancestry. We predicted ancestry with both the naive Bayesian classifier and multinomial logistic regression (MLR) algorithms, as these make different assumptions about genetic equilibrium28, and listed the results on Figs 3 and 4. The AIM-s results fairly matched and complemented phenotypic information. All Hun age individuals revealed admixture derived from European and East Asian ancestors, while 8/15 Avar age individuals showed predominantly East Asian origin with both methods, 4 individuals were definitely European, while two showed evidence of admixture. The KFP/31 sample gave contradicting results due to low coverage. Conqueror samples from the Magyarhomorog (MH) and Sárrétudvari (SH) cemeteries showed mostly European ancestry in agreement with their phenotypes and Y Hg-s, though MLR detected a significant east Asian ancestry component and the SH/103 women was classified east Asian despite her blond hair. The Karos (K) and Kenézlő (KEF) populations were profoundly admixed, comprising individuals of purely East Asian, European and mixed origin in nearly identical proportions, again in agreement with results obtained from uniparental and phenotypic markers. The determined variable autosomal loci are also suitable to exclude possible direct (parent-child, sibling) genetic relatedness29, thus we compared the autosomal genotypes of all individuals sharing either maternal or paternal Hg-s. Direct kinship could not be excluded between the MH/9 and MH/16 individuals with identical phenotypes, suggesting that MH/9 probably also belongs to Hg I2a1a2b-L621, despite its uncovered L621 marker. KEF2per1027 and KEF2per1045 were probably brothers as they had identical mitogenomes, Y Hg-s and blue eye color besides sharing autosomal alleles. The same applies to K3/1 and K3/13 individuals who were probably also brothers. We could not exclude possible direct paternal relationship between K2/36, K2/18 and K2/41 but the first two samples had unsatisfactory coverage to make a strong statement. We have tested two SNP-s (rs4988235 and rs182549) associated with the adult lactase persistence phenotype in Europe15. Individuals carrying derived alleles in these loci are able to digest lactose in dairy products during adulthood without symptoms of lactose intolerance. Allele frequency of the persistence genotype varies throughout Eurasia30, reaching above 90% at some parts of Northwestern Europe, around 80% in present day Hungary, but drops below 30% in Central Asia and even lower in East Asia. We detected the derived persistence allele in all of the studied groups (Figs 3 and 4, Supplementary Table S2); 1/3 of the Hun period individuals, 2/14 of the Avar period individuals, and 6/31 of the Conqueror period individuals carried persistence alleles. It is remarkable that the persistence genotype seems to be associated with European origin, as all of the carriers were predicted to have predominantly European ancestors. This is in agreement with a previous study31, which found that all of the 11% Conqueror samples with persistence genotype carried European mtDNA Hg H. In addition all carriers were heterozygous, 6 of them for both SNP-s, but three of them carried just the rs182549 (-22018 G > A) derived allele suggesting previous admixture with non-carriers, possibly derived from East Eurasia.
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Post by Admin on Aug 14, 2020 7:19:32 GMT
Population genetic analysis The studied Conqueror group very likely represent real populations, as 24 of the 29 samples came from 4 nearby cemeteries (Karos 1,2,3 and Kenézlő) with identical archaeological and anthropological groupings and the studied Magyarhomorog individuals were also categorized as belonging to the same early Conqueror elite. The Avar group was assembled from several different cemeteries of a wider timespan, thus they cannot represent the Avar period population of the Carpathian Basin, however their relatively homogenous Hg distribution indicate that the Avar elite embodied the same east Eurasian sub-population throughout their reign, so it appeared to be meaningful to include them in the analysis. In order to find the most similar populations to our studied ones, we compared the Hg distribution of the Avar and Conqueror elite to that of 78 modern Eurasian populations (Supplementary Table S4) and represented their relations on MDS plot displayed on Fig. 5. Only one individual was included in the analysis from first degree relatives. In order to increase resolution, we separately calculated the frequencies of each sub-Hg-s which are present in our samples, while frequencies of all other subclades were combined as listed in Supplementary Table S4. Similar Hg distributions are mapped into neighboring positions on the MDS plot, which clearly separates populations according to their geographic locations. Along the x axis east Eurasian populations map to the right while Europeans are compressed at the left. Along the y axis Siberian populations are sequestered at the top, while East Asian ones at the bottom of the graph. The Avars are obviously mapped to the Siberian side with smallest weighted Euclidean distances from Koryaks (KRY), Teleuts (TEL), Khantys (KHT), Komis, (KOM) and Dolgans (DLG). The Conquerors are positioned between eastern Europeans, Central Asians and Siberians but their exact relations are hard to make out because of the crowding at the European side. Figure 5 In order to better discern the position of the Conquerors we redraw the MDS plot without the eastern Asian and Siberian populations (Fig. 6). Though having removed subset of the data MDS imaging in two-dimensions inevitably rearranged the remaining components, but the general organization of the population clusters remained unchanged: Western-Northern Europeans map to the left, Central-eastern European and Balkan people around the middle, Central Asians to the top right, and Caucasus-Middle East populations to bottom right. Conquerors remained between Central Asians and eastern Europeans, with smallest weighted Euclidean distances from Bashkirs (BSH), Hungarians (HUN), Tajiks (TJK), Estonians (EST), Kazakhs (KAZ), Uzbeks (UZB) and Slovaks (SVK). Figure 6 MDS plot of Y-chromosomal Hg distribution of 58 European and Central Asian populations including Conquerors (arrow). Population three letter codes are given in Supplementary Table S4. The considerable frequency of Hg N1a in Conquerors and especially in Avars facilitates another analysis in which the frequency distribution of their N1a subbranches can be compared to that of all Eurasian populations carrying this Hg, which is described in22. The N1a database of22 contains several relevant Eurasian populations missing from Supplementary Table S3, moreover the Y dataset of Supplementary Table S4 has a low resolution of N1a subclades, thus this analysis is expected to provide additional information. We combined the N1a dataset published in22 with our data as presented in Supplementary Table S5 and performed Principal Component Analysis (PCA) as shown on Fig. 7. Figure 7 PCA also separates populations according to their geographical positions, as identical colors appear in the same segments of the graph. The Avars map to the top right corner, close to eastern Siberian Chukchis (CHK), Yukaghirs (YUK), Eskimos (ESK) and Transbaikalian Buryats (BUR). The Conquerors (CONQ) map to the middle of the graph, very close to eastern European Belarusians (BLR), Ukrainians (UKR), Russians (RUS) and Polish (POL), not far from Volga-Uralic region Bashkirs (BSH), Volga Tatars (TAT), Komi Permians (KOMP) and Mordvins (MRD), also surrounded by Central Asian groups; Karanogays (KNO), Karakalpaks (KARA), Uzbeks (UZB) as well as Crimean Tatars (TATC), Mongols (MON), Selkups (SEL) and Dolgans from Taymyr (DLGT).
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Post by Admin on Aug 14, 2020 21:39:13 GMT
Discussion The origin and composition of the Conqueror paternal lineages fairly mirrors that of their maternal ones10; 20,7% of the Y-Hg-s originated from East Eurasia, this value is 30,4% for mtDNA; proportion of west Eurasian paternal lineages is 69% compared to 58,8% for mtDNA; while proportion of lineages with north-western European and Caucasus-Middle East origin are nearly the same affirming that both males and females of similar origin migrated together. Both MDS analysis of the entire Conqueror Y chromosome pool and PCA of their N1a lineages indicates that their admixture sources are found among Central Asians and eastern European Pontic Steppe groups, a finding comparable to what had been described for maternal lineages10. Composition of the Conqueror paternal lineages is very similar to that of Baskhirs, while their maternal composition was found most similar to Volga Tatars10. These modern populations are located next to each other, have similar prehistory32 and genetic structure derived from the same admixture sources detected in the Conquerors. Moreover it must be noted that Bashkirs were not represented in the mitogenome database while Volga Tatars are missing from our Y-chromosome database due to lack of data, but their N1a distribution is quite similar (Fig. 7), thus mtDNA results are in accord with Y-chromosomal ones.
The Conqueror-Bashkir relations are also supported by historical sources, as early Hungarians of the Carpathian Basin were reported to be identical to Baskhirs by Arabic historians like al-Masudi, al-Qazwini, al-Balhi, al-Istahri and Abu Hamid al-Garnati33, latter visited both groups at the same time around 1150 AD and used the term Bashgird to refer to the Hungarians in the Carpathian Basin. In addition parallels were found between several Conqueror and Bashkir tribe names and Bashkiria has been identified with Magna Hungaria, the motherland of Conquerors34.
We identified potential relatives within Conqueror cemeteries but not between them. The uniform paternal lineages of the small Karos3 (19 graves) and Magyarhomorog (17 graves) cemeteries approve patrilineal organization of these communities. The identical I2a1a2b Hg-s of Magyarhomorog individuals appears to be frequent among high-ranking Conquerors, as the most distinguished graves in the Karos2 and 3 cemeteries also belong to this lineage. The Karos2 and Karos3 leaders were brothers with identical mitogenomes10 and Y-chromosomal STR profiles (Fóthi unpublished). The Sárrétudvari commoner cemetery seems distinct from the others, containing other sorts of European Hg-s. Available Y-chromosomal and mtDNA data10 from this cemetery suggest that common people of the 10th century rather represented resident population than newcomers. The great diversity of Y Hg-s, mtDNA Hg-s, phenotypes and predicted biogeographic classifications of the Conquerors indicate that they were relatively recently associated from very diverse populations.
In contrast the studied Avar military leader group had a much more uniform origin. The Avar group carried predominantly East Eurasian lineages in accordance with their known Inner Asian origin inferred from archaeological and anthropological parallels as well as historical sources. However the unanticipated prevalence of their Siberian N1a Hg-s, sheds new light on their prehistory. Accepting their presumed Rouran origin would implicate a ruling class with Siberian ancestry in Inner Asia before Turkic take-over. The surprisingly high frequency of N1a1a1a1a3 Hg reveals that ancestors of contemporary eastern Siberians and Buryats could give a considerable part the Rouran and Avar elite, nevertheless a larger sample size from more Avar cemeteries are needed to clarify their exact composition.
The genetic profile of the Avar and Conqueror leader groups seems considerably different, as latter group is distinguished by the significant presence of European Hg-s; I2a1a2b-L621, R1b1a1b1a1a1-U106 and the Finno-Permic N1a1a1a1a2-Z1936 branch. Their Siberian N1a1a1a1a4 subclade also points at different source populations among ancestors of Yakuts, Evenks and Evens. Nevertheless the east Eurasian R1a subclade, R1a1a1b2a-Z94 seems to be a common element of the Hun, Avar and Conqueror elite. In contrast to Avars, all three Hun lineages have parallels among the Conquerors, but strong inferences cannot be drawn due to small sample size.
It is generally accepted that the Hungarian language was brought to the Carpathian Basin by the Conquerors. Uralic speaking populations are characterized by a high frequency of Y-Hg N, which have often been interpreted as a genetic signal of shared ancestry. Indeed, recently a distinct shared ancestry component of likely Siberian origin was identified at the genomic level in these populations, modern Hungarians being a puzzling exception35. The Conqueror elite had a significant proportion of N Hgs, 7% of them carrying N1a1a1a1a4-M2118 and 10% N1a1a1a1a2-Z1936, both of which are present in Ugric speaking Khantys and Mansis22. At the same time none of the examined Conquerors belonged to the L1034 subclade of Z1936, while all of the Khanty Z1936 lineages reported in36 proved to be L1034 which has not been tested in the22 study. Population genetic data rather position the Conqueror elite among Turkic groups, Bashkirs and Volga Tatars, in agreement with contemporary historical accounts which denominated the Conquerors as “Turks”37. This does not exclude the possibility that the Hungarian language could also have been present in the obviously very heterogeneous, probably multiethnic Conqueror tribal alliance.
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Post by Admin on Mar 26, 2021 21:49:26 GMT
Ancient genomic time transect from the Central Asian Steppe unravels the history of the Scythians Science Advances 26 Mar 2021: Vol. 7, no. 13, eabe4414 DOI: 10.1126/sciadv.abe4414 Abstract The Scythians were a multitude of horse-warrior nomad cultures dwelling in the Eurasian steppe during the first millennium BCE. Because of the lack of first-hand written records, little is known about the origins and relations among the different cultures. To address these questions, we produced genome-wide data for 111 ancient individuals retrieved from 39 archaeological sites from the first millennia BCE and CE across the Central Asian Steppe. We uncovered major admixture events in the Late Bronze Age forming the genetic substratum for two main Iron Age gene-pools emerging around the Altai and the Urals respectively. Their demise was mirrored by new genetic turnovers, linked to the spread of the eastern nomad empires in the first centuries CE. Compared to the high genetic heterogeneity of the past, the homogenization of the present-day Kazakhs gene pool is notable, likely a result of 400 years of strict exogamous social rules. Fig. 1 Geographic location and dates of the newly reported ancient genomes. (A) Map showing the locations of the 39 archaeological sites where the 117 individuals were retrieved and (B) their respective dates in years BCE/CE. The dates reported are 14C-calibrated (2-sigma) ranges for the sites comprehending at least one individual directly radiocarbon-dated; if more individuals are dated, we report the lowest and the highest values across all of them. If for a site, no individuals are dated, we report the date ranges based on the archaeological context (data file S1). The sites are colored according to their cultural affiliation. This same culture-based color code (top right) is maintained for all the figures in the main text and the Supplementary Materials. INTRODUCTION The transition to the Iron Age (IA) marks one of the most important events in the history of Eurasia. At the turn of the first millennium BCE, changes in the archeological record attest to the rise of several nomad cultures across the steppe, from the Altai to the western fringe of the Pontic-Caspian region (1). These cultures are often collectively referred to as Scythians based on the common features found in their mortuary contexts (2). Compared to the preceding Bronze Age (BA) populations, the Scythians went through a transition from a sedentary to a nomadic cattle-breeding lifestyle, showed an increase in warfare and advancements in military technologies (e.g., new types of iron weapons and horseback riding techniques, such as introducing the use of a saddle), and the establishment of hierarchical elite-based societies (3). Previous genomic studies have detected large-scale genetic turnovers (and therefore substantial human migrations) in the BA steppe, which eventually resulted in the formation of a homogeneous and widespread Middle and Late BA (LBA) gene pool that characterized the sedentary herders of the western and central steppe (“steppe_MLBA”) (4–7). The reasons that prompted the rapid decline of these MLBA cultures and the rise of the Scythians are still poorly understood. Scholars have pointed out, among the most relevant factors, the climatic humidification (8) and socioeconomic pressures from the neighboring farming civilizations, i.e., the ones linked to the Bactria Margiana Archaeological Complex (“BMAC”) (3). Three competing hypotheses have been debated regarding the origins of the Scythians: a Pontic-Caspian origin, supported by their assumed Iranian languages, a Kazakh Steppe origin supported by the archaeological findings, and a multiple independent origin from genetically distinct groups that adopted common cultural traits (2). The limited number of genomes so far retrieved from the IA steppe nomads provides a glimpse of their genetic diversity but is far from being sufficient to characterize complex patterns of admixture between various eastern and western Eurasian gene pools (9–12). From an archaeological perspective, the earliest IA burials associated with nomad-warrior cultures were identified in the eastern fringes of the Kazakh Steppe, in Tuva and the Altai region (ninth century BCE) (13). Following this early evidence, the Tasmola culture in central and north Kazakhstan is among the earliest major IA nomad warrior cultures emerging (eighth to sixth century BCE) (13). These earlier groups were followed by the iconic Saka cultures located in southeastern Kazakhstan and the Tian Shan mountains (sixth to second century BCE), the Pazyryk culture centered in the Altai mountains (fifth to first century BCE-CE), and the Sarmatians that first appeared in the southern Ural region (sixth to second century BCE) and later are found westward as far as the northern Caucasus and eastern Europe (fourth BCE to fourth CE) (1, 14–17). The nomad groups also influenced their sedentary neighbors, such as the ones associated with the Sargat cultural horizon (fifth to first century BCE) located in the northern forest-steppe zone between the Tobol and Irtysh rivers (3, 18). After the IA, the Kazakh Steppe served as a center for the expansion of multiple empires, such as the Xiongnu and Xianbei chiefdoms from the east (19) and the Persian-related kingdoms from the south (e.g., Kangju) (20). These events brought the demise of the eastern Scythian cultures, but the demographic turnovers associated with this cultural transition remain poorly understood (20). Furthermore, forms of nomadic lifestyle persisted in the Kazakh Steppe throughout the centuries. A key event in the recent history of the nomad populations happened in the 15th to 16th century CE when all the tribes living in the territory of present-day Kazakhstan were organized and grouped into three main hordes (Zhuzs): Elder Zhuz, Middle Zhuz, and Junior Zhuz located in southeast, central/northeast, and west Kazakhstan, respectively (21, 22). This division was a political and religious compromise between different nomadic tribes, which were spread across Central Asia and had to protect themselves from external threats after the collapse of the Golden Horde. This set the basis for the foundation of the Kazakh Khanate (1465 to 1847 CE). Today, Kazakh groups in Kazakhstan still maintain their tribal affiliations and revere their nomadic history preserving some aspects of its culture (21). One of these traditions is the “Zheti-ata,” which consists of keeping track of the family tree up to seven generations by paternal line to avoid marriage between kins (23). To understand the genetic structure of the different IA nomadic cultures as well as the demographic events associated with their origins and decline, we successfully generated genome-wide data from 111 ancient human individuals retrieved from 39 different archaeological sites across the Kazakh Steppe (Kazakhstan, Kyrgyzstan, and Russia) and one individual retrieved from a Hun elite burial located in present-day Hungary (text S1). Our dataset densely covers a time span ranging from the eighth century BCE to the fourth century CE and also includes three individuals from the medieval period (Fig. 1 and text S1). We also produced new genome-wide data from 96 modern-day Kazakh individuals belonging to several tribes affiliated to the three major Kazakh hordes (Zhuzh) covering the entire territory of present-day Kazakhstan to better understand how recent historical events have shaped the genetic structure of present-day nomads.
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Post by Admin on Mar 26, 2021 22:56:58 GMT
RESULTS Genome-wide data for 117 ancient individuals were obtained using an in-solution DNA capture technique designed to enrich for 1,233,013 single-nucleotide polymorphisms (SNPs) commonly referred as 1240K capture (Materials and Methods). Genome-wide data for 96 present-day Kazakh individuals were generated with the Affymetrix Axiom Genome-wide HumanOrigins SNP-chip (“HO”) (Materials and Methods). After performing quality controls, we retained all the 96 modern Kazakh individuals and 111 ancient individuals with at least >20,000 SNPs covered, obtaining a median of 793,636 successfully recovered SNPs and 1.5× autosomal coverage on the 1240K panel across all individuals (Materials and Methods and data file S1). We then merged the new data with a reference dataset of previously published modern and ancient individuals compiling a “1240KHO” dataset consisting of 586,594 SNPs overlapping with the modern genotype data that we used for performing global population structure analyses [i.e., PCA (principal components analysis) and ADMIXTURE]. We also produced a “1240K”-only dataset consisting of 1240K capture or whole-genome shotgun data pooled down to include 1240K sites only that we used for the rest of the analyses (Materials and Methods and tables S2 and S3). For population-based analyses, we grouped individuals according to their archaeological culture affiliation, spanning a defined time range after excluding genetic outliers shifted more than ±2 SD from the median PCs of their respective group (Materials and Methods and table S1). The IA transition in the Kazakh Steppe Overall, PCA and ADMIXTURE suggest that a substantial demographic shift occurred during the transition from the BA to the IA in the Kazakh Steppe (Fig. 2 and figs. S1 and S2). In contrast to the highly homogeneous steppe_MLBA cluster found across the Kazakh Steppe until the end of the second millennium BCE, the IA individuals are scattered across the PC space, most notably along PC1 and PC3. Their spread along these PCs suggests a varying degree of extra eastern Eurasian affinity compared to the MLBA population and extra affinity to southern populations ultimately related to the Neolithic Iranians and the Mesolithic Caucasus hunter-gatherers (from here on referred to as Iranian-related ancestry), respectively. Despite the high genetic variability, it is possible to appreciate homogeneous clusters of ancient individuals belonging to the same archaeological culture and/or geographic area (Fig. 2 and fig. S1). Following a chronological order, most of the individuals from the sites associated with the Early IA Tasmola culture (“Tasmola_650BCE”) and the published “Saka_Kazakhstan_600BCE” of central-north Kazakhstan cluster together in the middle of the PCA plot and show a uniform pattern of genetic components in ADMIXTURE analyses (Fig. 2, A and D, and figs. S1 and S2). The two previously published individuals from the Aldy Bel site in Tuva (Aldy_Bel_700BCE) also fall within this genetic cloud (Fig. 2A). This genetic profile persists in the later Middle and Late IA, shown by most individuals from the Pazyryk site of Berel (“Pazyryk_Berel_50BCE”) (Fig. 2B). This IA cluster is distinct from the previous steppe_MLBA groups inhabiting the same regions, most notably because of its substantial shift toward eastern Eurasians along PC1. In addition, we find outliers showing an even stronger shift to eastern Eurasians than the main cluster: two outliers from Pazyryk Berel time (“Pazyryk_Berel_50BCE_o”), three outliers from the Tasmola site of Birlik (“Tasmola_Birlik_640BCE”), and three of four individuals from the Korgantas phase of central-north Kazakhstan (24) (Fig. 2B and table S2). One female individual from Birlik (BIR013.A0101) with an eastern Eurasian genetic profile was unearthed with grave goods (a bronze mirror) that presented typical Eastern Steppe features (text S1). Fig. 2 PCA and ADMIXTURE analyses. (A to C) PC1 versus PC3 (outer plot) and PC1 versus PC2 (inner plot in the bottom right box) including all the IA, new and previously published individuals (filled symbols), relevant published temporally preceding groups (empty symbols), and present-day Kazakh individuals (small black points). The gray labels in this and the following panel indicate broad geographical groupings of the modern individuals used to calculate PCA that in the plots are shown as small gray points. The ancient samples are distributed in (A) to (C) sliced in three different time intervals as reported in the top right corner. (D) Histograms of ADMIXTURE analysis (K = 12; fig. S2) for the new IA and post-IA individuals and selected subset of temporally preceding groups maximizing key genetic components and a randomly selected subset of present-day Kazakh from the three main Zhuzs. The classical IA Sakas from the Tian Shan region to the south (“Saka_TianShan_600BCE,” “Saka_TianShan_400BCE,” and previously published “Pub_Saka_TianShan_200BCE”) are distributed along a cline between the Tasmola/Pazyryk cluster and the Iranian-related gene pool, along PC3 (Fig. 2, A and B). A stronger affinity to the Neolithic Iranians is also found in ADMIXTURE analyses (Fig. 2D and fig. S2). The shift toward the Iranian-related gene pool is found as early as ~650 BCE in one Eleke_Sazy_650BCE individual (ESZ002) retrieved from an elite Saka burial, while three of four individuals from one of the earliest Tian Shan Saka site of Caspan_700BCE fall within the Tasmola/Pazyryk cloud. The individuals associated with the sedentary Sargat culture in the forest-steppe zone north of the Kazakh Steppe (“Sargat_300BCE”) partially overlap with the Tasmola/Pazyryk cluster although forming a cloud in PCA that is shifted toward western Eurasians and toward the uppermost cline of northern Inner Eurasians (PC1 and PC2, respectively; Fig. 2B). In line with PCA, Sargat individuals carry a small proportion of a different type of northeast Asian ancestry not detected in the nomad groups further to the south (Fig. 2D). With the exception of one outlier falling in the Tasmola/Pazyryk cloud, the individuals associated with the Sarmatian culture are highly homogeneous despite being spread over a wide geographic area and time period (i.e., early “Sarmatians_450BCE,” late “Sarmatians_150BCE,” and western “Sarmatians_CaspianSteppe_350BCE”; Fig. 2, A and B). Our new data from seven early Sarmatian sites in central and western Kazakhstan (Sarmatians_450BCE) document that this gene pool was already widespread in this region during the early phases of the Sarmatian culture. Furthermore, Sarmatians show a sharp discontinuity from the other IA groups by forming a cluster shifted toward west Eurasians (Fig. 2 and table S2).
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